CNVkit
v0.8.0
Quick start
Copy number calling pipeline
Plots and graphics
Text and tabular reports
Compatibility and other I/O
Additional scripts
Calling copy number gains and losses
Tumor analysis
Tumor heterogeneity
Germline analysis
Whole-genome sequencing and targeted amplicon capture
Gender
Bias corrections
File formats
Python API (cnvlib package)
CNVkit
Docs
»
Overview: module code
Edit on GitHub
All modules for which code is available
cnvlib
cnvlib.antitarget
cnvlib.call
cnvlib.cnary
cnvlib.commands
cnvlib.core
cnvlib.coverage
cnvlib.diagram
cnvlib.export
cnvlib.fix
cnvlib.gary
cnvlib.importers
cnvlib.metrics
cnvlib.parallel
cnvlib.plots
cnvlib.reference
cnvlib.reports
cnvlib.segmentation
cnvlib.smoothing
cnvlib.target
cnvlib.vary
Read the Docs
v: v0.8.0
Versions
latest
stable
v0.8.0
v0.7.11
v0.7.10
v0.7.9
v0.7.8
v0.7.7
v0.7.6
v0.7.5
v0.7.4
v0.7.3
v0.6.1
v0.5.2
v0.4.1
v0.3.5
master
Downloads
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.